The NEST: A Biotechnology Consulting Firm

The NEST: A Biotechnology Consulting FirmThe NEST: A Biotechnology Consulting FirmThe NEST: A Biotechnology Consulting Firm

The NEST: A Biotechnology Consulting Firm

The NEST: A Biotechnology Consulting FirmThe NEST: A Biotechnology Consulting FirmThe NEST: A Biotechnology Consulting Firm
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  • Bioinformatic Analysis
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Bioinformatic Analysis Services

At The NEST, we provide expert bioinformatics and data analysis services for microbiome, genomics, and multi-omics studies. Whether you are generating data for discovery research, product development, regulatory submission, or publication, we help you turn complex sequencing data into clear, defensible, and actionable insights.

Our strength lies at the intersection of deep biological understanding, statistical rigor, and clear scientific communication. We don’t just run pipelines - we interpret results in biological context and present them in ways that stand up to peer review, regulatory scrutiny, and executive decision-making.


Microbiome & Genomics Expertise

We specialize in the analysis of microbiome datasets generated from 6S rRNA gene sequencing, shotgun metagenomics, metatranscriptomics, and related approaches. This includes taxonomic profiling, functional annotation, diversity analyses, and longitudinal or comparative study designs. Our experience spans human health, probiotics, biomanufacturing, environmental microbiology, and clinical research.

Beyond microbiome data, we also support general genomics and NGS workflows, including whole-genome sequencing, amplicon sequencing, and custom analytical pipelines tailored to your experimental design.


Robust Statistical Analysis

Strong bioinformatics requires more than software - it requires statistical discipline. We apply appropriate, transparent, and reproducible statistical methods to ensure your conclusions are scientifically sound. 


  • Alpha and beta diversity analyses
     
  • Ordination methods (PCA, PCoA, NMDS)
     
  • Hypothesis testing and group comparisons (e.g., PERMANOVA, non-parametric tests)
     
  • Differential abundance and compositional data analysis
     
  • Power analysis and study design consultation
     

We emphasize methodological transparency and help clients avoid common pitfalls in microbiome and high-dimensional data analysis.


Publication-Quality Figures & Reporting

We produce publication-ready figures that clearly communicate results to scientific, regulatory, and commercial audiences. Visualizations are customized - not templated - and designed to tell the scientific story accurately and compellingly. 


  • High-resolution plots and heatmaps
     
  • Ordination and clustering figures
     
  • Statistical summaries and annotated visuals
     
  • Fully reproducible analysis scripts (R, Python, or both)
     

We regularly support manuscripts, white papers, grant applications, investor materials, and regulatory documentation.


Reproducibility & Standards-Driven Approach

As leaders in microbiome standards and quality control, we place a strong emphasis on reproducibility, documentation, and data integrity. All analyses can be delivered with fully documented workflows to support internal reuse, audits, or future expansion. This is particularly valuable for organizations operating in regulated or pre-regulated spaces.


Who We Work With


  • Biotech and diagnostics companies
     
  • Academic and clinical research groups
     
  • Probiotic and microbiome product developers
     
  • Contract research organizations (CROs)
     
  • Startups preparing for funding, publication, or regulatory engagement
     

If you have sequencing data and need clarity, credibility, and confidence in your results, The NEST can help.

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